Status March 2012: Difference between revisions

From wiki.openchemistry.org
Jump to navigation Jump to search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 3: Line 3:
==ChemData==
==ChemData==
* Rewrote and generalized data import scripts using Python.
* Rewrote and generalized data import scripts using Python.
* Added script to generate diagrams using OpenBabel's SVG output and import them into the molecule collection. This gave increased import speed versus the previous method of fetching diagrams from an internet resource.
* Implemented script to generate diagrams using OpenBabel's SVG output and import them into the molecule collection. This gave increased import speed versus the previous method of fetching diagrams from an internet resource.
* Created new plot tooltip item to display molecule diagrams in the chart dialog.
* Added two new data visualization dialogs: Scatter Plot Matrix and Parallel Coordinates.
* Current Screenshots:
<gallery widths=300px heights=300px>
Image:ChemData_Query_Screenshot.png|Main window showing the results of a substructure query. Diagrams are those generated from OpenBabel using the new import script.
Image:ChemData Plot with Diagram Tooltip.png|XY Chart showing tooltips with molecule diagrams.
Image:ChemData Plot Matrix Screenshot.png|Scatter Plot Matrix Dialog displaying five different descriptors for the molecules in the database.
Image:ChemData_Parallel_Coordinates.png|Parallel Coordinates plot showing a selection of multiple parameters.
</gallery>
 
==CML-HDF5==
* Began designing the specification for storing heavy-data from CML files in HDF5 files.
* See: [[CML HDF5]]


[[Category:Status Reports]]
[[Category:Status Reports]]

Latest revision as of 14:40, 16 March 2012

Current Activity

ChemData

  • Rewrote and generalized data import scripts using Python.
  • Implemented script to generate diagrams using OpenBabel's SVG output and import them into the molecule collection. This gave increased import speed versus the previous method of fetching diagrams from an internet resource.
  • Created new plot tooltip item to display molecule diagrams in the chart dialog.
  • Added two new data visualization dialogs: Scatter Plot Matrix and Parallel Coordinates.
  • Current Screenshots:

CML-HDF5

  • Began designing the specification for storing heavy-data from CML files in HDF5 files.
  • See: CML HDF5